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deploy simbiology models for standalone applications

create standalone applications to simulate simbiology® models on target computers that do not have matlab® and simbiology installed. create standalone apps by using compiler.build.standaloneapplication or the application compiler app. standalone applications run on windows®, linux®, and mac os. you can also design interactive web apps using the app designer, package them using matlab compiler™, and host them on matlab web app server™.

tip

using a simfunction object for deployment is recommended for most use cases. however, if you need the flexibility to be able to change the simulation settings in the deployed app, use .

functions

createsimfunction (model)create simfunction object
export simbiology models for deployment and standalone applications
simulate exported simbiology model
prepare exported simbiology model for acceleration
return exported simbiology model dose object
get indices into valueinfo and initialvalues properties
determine whether an exported simbiology model is accelerated
build and package functions into standalone applications
create standalone application for deployment outside matlab
create an archive for deployment to matlab web app server
create an installer for files generated by matlab compiler
package app designer apps for web deployment
set up matlab web app server from command line on windows, linux, and macos systems

objects

simfunction objectfunction-like interface to execute simbiology models
simfunctionsensitivity object, subclass of simfunction object
define drug dosing protocol
define drug dosing protocol
store alternate component values
solver settings information for model simulation
simbiology model solver options
options for logged species
dimensional analysis and unit conversion options
exported simbiology model object
simulation settings for exported simbiology model
repeated doses for exported simbiology model
schedule dose for exported simbiology model
settings for explicit tau-leaping solver of exported simbiology model
settings for implicit tau-leaping stochastic simulation of exported simbiology model
settings for deterministic, ordinary differential equation simulation of exported simbiology model
exported simbiology model dose object
settings for stochastic simulation of exported simbiology model
modifiable species, compartments, or parameters in exported simbiology model

apps

application compilerpackage matlab programs for deployment as standalone applications
build qsp, pk/pd, and mechanistic systems biology models interactively
simbiology model analyzeranalyze qsp, pk/pd, and mechanistic systems biology models

topics


  • this example shows how to compile a simbiology model using simfunction and matlab compiler and create a web app archive to deploy in matlab web app server.

  • deploy a simbiology exported model

    this example shows how to deploy a graphical application that simulates a simbiology® model.

  • deploy web app (matlab compiler)

    learn how to deploy a web app.

  • develop apps using app designer

    develop apps interactively using app designer

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